USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: H2A2A_HUMAN USC-OGP 2-DE database:  H2A2A_HUMAN H2A2A_HUMAN General information about the entry View entry in simple text format Entry name H2A2A_HUMAN Primary accession number Q6FI13 Secondary accession number(s) P20670 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Histone H2A type 2-A; AltName: Full=Histone H2A.2; AltName: Full=Histone H2A/o;. Gene name Name=HIST2H2AA3 Synonyms=H2AFO, HIST2H2AA    and Name=HIST2H2AA4 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1333: pI=4.59; Mw=16158 SPOT OGP-1335: pI=5.02; Mw=16085 SPOT OGP-1336: pI=5.13; Mw=15865 SPOT OGP-1338: pI=5.68; Mw=15649 Cross-references UniProtKB/Swiss-Prot Q6FI13; H2A2A_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name H2A2A_HUMAN Primary accession number Q6FI13 Secondary accession number(s) B2R5F0 P20670 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 140) Name and origin of the protein Description RecName: Full=Histone H2A type 2-A; AltName: Full=Histone H2A.2; AltName: Full=Histone H2A/o; Gene name Name=HIST2H2AA3 Synonyms=H2AFO, HIST2H2AA    and Name=HIST2H2AA4 Encoded on Name=HIST2H2AA3; Synonyms=H2AFO, HIST2H2AA; and Name=HIST2H2AA4 Keywords Acetylation; Chromosome; Citrullination; Complete proteome; DNA-binding; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL L19779; AAC24465.1; -; mRNA EMBL AY131971; AAN59957.1; -; Genomic_DNA EMBL AK312163; BAG35097.1; -; mRNA EMBL CR536525; CAG38762.1; -; mRNA EMBL CR541872; CAG46670.1; -; mRNA EMBL AL591493; CAI12562.1; -; Genomic_DNA EMBL AL591493; CAI12565.1; -; Genomic_DNA EMBL CH878687; EAW50859.1; -; Genomic_DNA EMBL BC096705; AAH96705.1; -; mRNA EMBL BC096739; AAH96739.1; -; mRNA EMBL BC098171; AAH98171.1; -; mRNA CCDS CCDS30849.1; -; . CCDS CCDS934.1; -; . PIR S06742; S06742; . RefSeq NP_001035807.1; NM_001040874.1; . RefSeq NP_003507.1; NM_003516.2; . UniGene Hs.530461; -; . UniGene Hs.745563; -; . ProteinModelPortal Q6FI13; -; . SMR Q6FI13; -; . BioGrid 113933; 31; . BioGrid 593221; 6; . DIP DIP-33167N; -; . IntAct Q6FI13; 21; . MINT MINT-1802642; -; . STRING 9606.ENSP00000358158; -; . iPTMnet Q6FI13; -; . PhosphoSitePlus Q6FI13; -; . SwissPalm Q6FI13; -; . DMDM 74757558; -; . EPD Q6FI13; -; . MaxQB Q6FI13; -; . PaxDb Q6FI13; -; . PeptideAtlas Q6FI13; -; . PRIDE Q6FI13; -; . TopDownProteomics Q6FI13; -; . DNASU 723790; -; . DNASU 8337; -; . Ensembl ENST00000369159; ENSP00000358155; ENSG00000203812; . Ensembl ENST00000607355; ENSP00000475814; ENSG00000272196; . GeneID 723790; -; . GeneID 8337; -; . KEGG hsa:723790; -; . KEGG hsa:8337; -; . UCSC uc001esw.4; human; . CTD 723790; -; . CTD 8337; -; . DisGeNET 723790; -; . DisGeNET 8337; -; . GeneCards HIST2H2AA3; -; . GeneCards HIST2H2AA4; -; . HGNC HGNC:4736; HIST2H2AA3; . HGNC HGNC:29668; HIST2H2AA4; . HPA HPA041189; -; . MIM 142720; gene; . neXtProt NX_Q6FI13; -; . OpenTargets ENSG00000272196; -; . PharmGKB PA29113; -; . eggNOG KOG1756; Eukaryota; . eggNOG COG5262; LUCA; . GeneTree ENSGT00760000118934; -; . GeneTree ENSGT00870000136488; -; . HOGENOM HOG000234652; -; . HOVERGEN HBG009342; -; . InParanoid Q6FI13; -; . KO K11251; -; . OMA YLTAEIV; -; . OrthoDB EOG091G0XGD; -; . PhylomeDB Q6FI13; -; . TreeFam TF300137; -; . Reactome R-HSA-1221632; Meiotic synapsis; . Reactome R-HSA-171306; Packaging Of Telomere Ends; . Reactome R-HSA-201722; Formation of the beta-catenin:TCF transactivating complex; . Reactome R-HSA-212300; PRC2 methylates histones and DNA; . Reactome R-HSA-2299718; Condensation of Prophase Chromosomes; . Reactome R-HSA-2559580; Oxidative Stress Induced Senescence; . Reactome R-HSA-2559582; Senescence-Associated Secretory Phenotype (SASP); . Reactome R-HSA-2559586; DNA Damage/Telomere Stress Induced Senescence; . Reactome R-HSA-3214815; HDACs deacetylate histones; . Reactome R-HSA-3214847; HATs acetylate histones; . Reactome R-HSA-3214858; RMTs methylate histone arginines; . Reactome R-HSA-427359; SIRT1 negatively regulates rRNA Expression; . Reactome R-HSA-427389; ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression; . Reactome R-HSA-427413; NoRC negatively regulates rRNA expression; . Reactome R-HSA-5250924; B-WICH complex positively regulates rRNA expression; . Reactome R-HSA-5334118; DNA methylation; . Reactome R-HSA-5578749; Transcriptional regulation by small RNAs; . Reactome R-HSA-5617472; Activation of anterior HOX genes in hindbrain development during early embryogenesis; . Reactome R-HSA-5625886; Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3; . Reactome R-HSA-5689603; UCH proteinases; . Reactome R-HSA-5689880; Ub-specific processing proteases; . Reactome R-HSA-5689901; Metalloprotease DUBs; . Reactome R-HSA-606279; Deposition of new CENPA-containing nucleosomes at the centromere; . Reactome R-HSA-73728; RNA Polymerase I Promoter Opening; . Reactome R-HSA-73777; RNA Polymerase I Chain Elongation; . Reactome R-HSA-912446; Meiotic recombination; . Reactome R-HSA-977225; Amyloid fiber formation; . GeneWiki HIST2H2AA3; -; . Proteomes UP000005640; Chromosome 1; . Bgee ENSG00000183558; -; . CleanEx HS_HIST2H2AA3; -; . CleanEx HS_HIST2H2AA4; -; . Genevisible Q6FI13; HS; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0000790; C:nuclear chromatin; IBA:GO_Central; . GO GO:0000786; C:nucleosome; IEA:UniProtKB-KW; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0003677; F:DNA binding; IBA:GO_Central; . GO GO:0006342; P:chromatin silencing; IBA:GO_Central; . Gene3D 1.10.20.10; -; 1; . InterPro IPR009072; Histone-fold; . InterPro IPR002119; Histone_H2A; . InterPro IPR007125; Histone_H2A/H2B/H3; . InterPro IPR032454; Histone_H2A_C; . InterPro IPR032458; Histone_H2A_CS; . Pfam PF00125; Histone; 1; . Pfam PF16211; Histone_H2A_C; 1; . PRINTS PR00620; HISTONEH2A; . SMART SM00414; H2A; 1; . SUPFAM SSF47113; SSF47113; 1; . PROSITE PS00046; HISTONE_H2A; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

[Home]